BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A07LP1|AL429667
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1257 1606 0.0
>3x_Contig1257
Length = 4889
Score = 1606 bits (809), Expect = 0.0
Identities = 811/813 (99%)
Strand = Plus / Plus
Query: 1 gatcatagtcgtagtcgccatgaacttggtactagttcccacgtaaaaaaggacaagtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3574 gatcatagtcgtagtcgccatgaacttggtactagttcccacgtaaaaaaggacaagtag 3633
Query: 61 agaaactgaaccctccatacagggttcagcttctcttgtatgtttaatacacccaaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3634 agaaactgaaccctccatacagggttcagcttctcttgtatgtttaatacacccaaacac 3693
Query: 121 cacatttattgccatacattcttaaagggtgtcttctgtcttacagtgagaccaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3694 cacatttattgccatacattcttaaagggtgtcttctgtcttacagtgagaccaaaaaaa 3753
Query: 181 aaaattgtttttgcacttgaaacctttttagttttattacagaaaatagawcttgagaac 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3754 aaaattgtttttgcacttgaaacctttttagttttattacagaaaatagaacttgagaac 3813
Query: 241 agttagacttaatggagaccaaagaattgagtatttgccatttaggcctataaagataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3814 agttagacttaatggagaccaaagaattgagtatttgccatttaggcctataaagataac 3873
Query: 301 aatagccgcaagaggatttaaactctaccattccacgcttgattgcccacaatattactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3874 aatagccgcaagaggatttaaactctaccattccacgcttgattgcccacaatattactg 3933
Query: 361 gcgatttcacttctacgcttttttggttacttctttgactgccaatttcagttaatcgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 gcgatttcacttctacgcttttttggttacttctttgactgccaatttcagttaatcgga 3993
Query: 421 atactgtttgtttaaattggtatctttttttaggaccggtgatttattattagtacaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3994 atactgtttgtttaaattggtatctttttttaggaccggtgatttattattagtacaagt 4053
Query: 481 gaagtgaagtagcaaagacaattgtagcaatagtactcgttttactgttatcatcacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4054 gaagtgaagtagcaaagacaattgtagcaatagtactcgttttactgttatcatcacatc 4113
Query: 541 ccgttctgaaatttctcggtttctctttaggaataagcgttcagtgaagcactttttacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4114 ccgttctgaaatttctcggtttctctttaggaataagcgttcagtgaagcactttttacc 4173
Query: 601 tttttttttctgtatagcaatcgtgcttttcgagtcacagagatcaacatcctttgtttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4174 tttttttttctgtatagcaatcgtgcttttcgagtcacagagatcaacatcctttgtttg 4233
Query: 661 tgttgtgggtacttctgattgaggaagaattaaagtcaagatttccaacgattcggatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4234 tgttgtgggtacttctgattgaggaagaattaaagtcaagatttccaacgattcggatat 4293
Query: 721 ttggtgttctacaattgtggataacaagataatagtacatcgcattatttttggcagcmt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4294 ttggtgttctacaattgtggataacaagataatagtacatcgcattatttttggcagcat 4353
Query: 781 tgttgaggggagttgaatgtttgtggaattaaa 813
|||||||||||||||||||||||||||||||||
Sbjct: 4354 tgttgaggggagttgaatgtttgtggaattaaa 4386
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,064
Number of Sequences: 1807
Number of extensions: 12064
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)